Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2513

Experiment: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 10880 and 10881 are separated by 238 nucleotides mRNA_2512: 10880 - Hypothetical Protein, at 326,748 to 327,391 10880 mRNA_2513: 10881 - Hypothetical Protein, at 327,630 to 328,925 10881

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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326,630 + +0.7
326,644 - +0.0
326,647 - -0.6
326,656 - -0.1
326,659 + +0.3
326,767 + +0.2
326,847 + 10880 mRNA_2512 0.15 +1.3
326,956 + 10880 mRNA_2512 0.32 +1.6
326,960 - 10880 mRNA_2512 0.33 -0.9
327,062 - 10880 mRNA_2512 0.49 +1.4
327,191 - 10880 mRNA_2512 0.69 -1.0
327,262 - 10880 mRNA_2512 0.80 -0.2
327,405 - -0.7
327,508 + -1.4
327,540 + +0.6
327,552 + +0.0
327,704 + +0.4
328,090 - 10881 mRNA_2513 0.35 -1.6
328,111 - 10881 mRNA_2513 0.37 +1.5
328,278 - 10881 mRNA_2513 0.50 +1.1
328,300 + 10881 mRNA_2513 0.52 -0.6
328,394 - 10881 mRNA_2513 0.59 +0.8
328,416 + 10881 mRNA_2513 0.61 -0.2
328,435 - 10881 mRNA_2513 0.62 -0.4
328,506 - 10881 mRNA_2513 0.68 -0.9
328,556 + 10881 mRNA_2513 0.71 +0.6
328,576 - 10881 mRNA_2513 0.73 -1.3
328,601 - 10881 mRNA_2513 0.75 +3.2
328,601 - 10881 mRNA_2513 0.75 -0.2
328,601 - 10881 mRNA_2513 0.75 +0.8
328,849 - +0.7
328,853 - +0.6
329,018 + +0.2
329,133 + +0.0
329,280 - +0.1
329,304 - +2.7
329,307 + +1.1
329,403 + -0.7
329,408 - -0.9
329,565 - -0.0
329,829 - -0.5

Or see this region's nucleotide sequence