Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2696

Experiment: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 11064 and 11065 are separated by 890 nucleotides mRNA_2696: 11064 - K02147 ATPeV1B, ATP6B V-type H+-transporting ATPase subunit B, at 25,787 to 28,355 11064 mRNA_2697: 11065 - Hypothetical Protein, at 29,246 to 31,443 11065

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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24,880 - +1.2
24,881 - -0.8
24,882 - +1.2
24,884 - -0.7
24,887 - -1.2
24,890 + -1.3
24,893 + -1.0
24,898 - +1.3
24,906 - -0.3
24,910 - -0.1
24,988 + -0.4
25,051 + +0.3
25,101 - +0.8
25,175 - +0.8
25,194 - -0.5
25,236 + +3.2
25,258 - +1.4
25,263 - -2.3
25,292 - +1.9
25,294 - +0.6
25,294 - +0.8
25,313 + +0.2
25,344 - +0.9
25,362 - -0.5
25,376 + +0.1
25,439 - +2.1
25,447 + +1.9
25,459 + +1.5
25,466 - -0.2
25,469 - +0.0
25,471 - +2.7
25,575 + -0.4
25,586 + -0.3
25,642 + -0.4
25,654 - -0.6
25,668 + +2.5
25,758 + +0.5
25,765 + +0.8
25,770 + +0.3
28,411 - +0.9
28,688 - +1.2
28,697 - +1.1
28,716 + +0.1
28,845 + +0.9
29,004 - -0.1
29,011 + +1.1
29,014 - -1.6
29,024 - +1.8
29,032 + +0.1
29,033 - +1.3
29,044 - +0.6
29,045 - +0.3
29,160 - +2.8
29,161 - +1.1
29,186 + +1.9
29,323 - +0.5

Or see this region's nucleotide sequence