Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3403

Experiment: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 11770 and 11771 are separated by 894 nucleotides11771 and 11772 are separated by 694 nucleotides mRNA_3402: 11770 - SUPERFAMILY--SSF49899, at 1,292 to 3,329 11770 mRNA_3403: 11771 - BLAST Myc-type, basic helix-loop-helix (bHLH) domain [Xanth..., at 4,224 to 7,427 11771 mRNA_3404: 11772 - K13171 SRRM1, SRM160 serine/arginine repetitive matrix protein 1, at 8,122 to 9,979 11772
No fitness data for strains in range 3,224 to 8,427

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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Or see this region's nucleotide sequence