Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4001

Experiment: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt mRNA_4001: 12369 - Hypothetical Protein, at 1,120,391 to 1,121,103 12369

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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1,119,611 - +0.6
1,120,564 + 12369 mRNA_4001 0.24 -2.6
1,120,622 + 12369 mRNA_4001 0.32 +2.6
1,120,720 + 12369 mRNA_4001 0.46 +1.3
1,121,000 - 12369 mRNA_4001 0.85 +0.4
1,121,867 - -0.1
1,121,874 - +2.5
1,121,890 - +1.1

Or see this region's nucleotide sequence