Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4517

Experiment: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt mRNA_4517: 12885 - K03685 rnc, DROSHA, RNT1 ribonuclease III, at 366,231 to 367,464 12885

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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365,480 + +1.6
365,758 - +1.7
365,881 + +1.1
365,935 + +0.9
365,943 - +0.0
365,949 - -0.1
366,062 - -0.1
366,072 - -0.7
366,075 - -0.6
366,078 - +1.4
366,090 + +0.2
367,729 - +1.4
367,737 - +0.7
367,738 + -0.6
367,743 + -0.2
368,001 + -0.2
368,011 - -0.1

Or see this region's nucleotide sequence