Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4755

Experiment: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 13123 and 13124 are separated by 305 nucleotides mRNA_4755: 13123 - Hypothetical Protein, at 934,483 to 935,126 13123 mRNA_4756: 13124 - ProSiteProfiles-F-box domain profile.-PS50181,SUPERFAMILY--SSF52047, at 935,432 to 936,982 13124

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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933,584 - +1.4
933,598 + +0.8
933,737 + +2.1
933,760 + +1.2
933,760 + +1.7
933,770 + +2.4
933,874 - -0.5
933,878 + +2.5
933,914 + +0.7
934,279 - +2.0
934,279 - -0.2
934,286 + -0.9
934,334 - +2.0
934,633 - 13123 mRNA_4755 0.23 +2.9
934,740 + 13123 mRNA_4755 0.40 +1.3
934,913 + 13123 mRNA_4755 0.67 +0.3
935,004 - 13123 mRNA_4755 0.81 +1.7
935,059 + 13123 mRNA_4755 0.89 +0.5
935,062 + +1.3
935,339 - +0.6
935,339 - +1.1
935,343 + +0.1
935,346 + +0.9
935,400 - -0.6
935,506 - -0.1
935,640 + 13124 mRNA_4756 0.13 -0.3
935,890 - 13124 mRNA_4756 0.30 +1.3
935,987 - 13124 mRNA_4756 0.36 +0.8
936,108 + 13124 mRNA_4756 0.44 -1.4

Or see this region's nucleotide sequence