Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5387

Experiment: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt mRNA_5387: 13755 - Hypothetical Protein, at 624,312 to 624,933 13755

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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623,478 - +0.0
623,731 - +1.3
623,852 - -0.3
623,872 + +1.0
624,032 + +1.4
624,058 + -0.6
624,693 + 13755 mRNA_5387 0.61 +0.9
624,699 + 13755 mRNA_5387 0.62 -0.0
624,796 + 13755 mRNA_5387 0.78 +0.4
624,813 + 13755 mRNA_5387 0.81 -0.1
624,828 + 13755 mRNA_5387 0.83 -2.5
625,098 + +0.6
625,158 - +0.5
625,257 + -1.2
625,382 - +1.5
625,434 + -0.1
625,522 + +0.0
625,544 - -1.8
625,599 - -0.1
625,653 + -1.8
625,690 + +0.4
625,717 + -0.6
625,726 + +0.1
625,726 + +0.6
625,809 + +0.3
625,882 - +0.4

Or see this region's nucleotide sequence