Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6147

Experiment: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 14515 and 14516 are separated by 661 nucleotides mRNA_6147: 14515 - Hypothetical Protein, at 120,652 to 120,840 14515 mRNA_6148: 14516 - Hypothetical Protein, at 121,502 to 122,312 14516

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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120,055 - -1.4
120,193 - +0.1
120,196 - +0.4
120,332 - -0.0
120,451 + +0.8
120,474 - +0.0
120,640 - +0.4
120,932 - +1.7
121,112 - -0.2
121,207 - -0.2
121,216 + -0.2
121,333 + -0.1
121,445 + -0.5
121,780 + 14516 mRNA_6148 0.34 +0.4

Or see this region's nucleotide sequence