Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6499

Experiment: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 14866 and 14867 are separated by 53 nucleotides mRNA_6498: 14866 - K00226 pyrD dihydroorotate dehydrogenase (fumarate), at 929,512 to 931,049 14866 mRNA_6499: 14867 - K12668 OST2, DAD1 oligosaccharyltransferase complex subunit epsilon, at 931,103 to 931,809 14867

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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930,147 + 14866 mRNA_6498 0.41 +2.0
930,557 + 14866 mRNA_6498 0.68 -0.4
930,669 + 14866 mRNA_6498 0.75 -1.2
931,879 - +0.3

Or see this region's nucleotide sequence