Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6569

Experiment: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 14937 and 14938 are separated by 350 nucleotides mRNA_6569: 14937 - K02978 RP-S27e, RPS27 small subunit ribosomal protein S27e, at 1,122,107 to 1,122,716 14937 mRNA_6570: 14938 - K09184 GATAF GATA-binding protein, other eukaryote, at 1,123,067 to 1,127,630 14938

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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1,121,115 - +1.4
1,121,402 - +0.0
1,121,410 + -0.3
1,121,529 + -0.7
1,121,563 - -0.2
1,121,579 - -0.4
1,121,670 - +1.1
1,121,689 - +0.2
1,121,698 + +1.0
1,122,893 + +0.4
1,123,072 - +0.8
1,123,324 - -0.9
1,123,348 + -1.1

Or see this region's nucleotide sequence