Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7013

Experiment: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 15380 and 15381 are separated by 425 nucleotides mRNA_7012: 15380 - KOG4364 Chromatin assembly factor-I, at 668,588 to 672,215 15380 mRNA_7013: 15381 - K10755 RFC2_4 replication factor C subunit 2/4, at 672,641 to 674,296 15381

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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672,475 - +1.3
672,488 + -0.1
672,502 - -0.7
672,502 + -2.1
672,513 + +2.8
672,651 + +0.9
674,384 + +0.7
674,391 - +0.3
674,393 - +0.4
674,396 - -0.0
674,401 - +2.0
674,401 - -0.8
674,404 + +0.8
674,407 + +1.4
674,408 - +0.7
674,414 - +0.5
674,431 - +0.3
674,434 - +0.2
674,577 - +1.5
674,722 - -0.2
674,733 + +0.6

Or see this region's nucleotide sequence