Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7031

Experiment: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 15399 and 15400 are separated by 138 nucleotides mRNA_7031: 15399 - K03131 TAF6 transcription initiation factor TFIID subunit 6, at 712,719 to 714,354 15399 mRNA_7032: 15400 - Hypothetical Protein, at 714,493 to 715,089 15400

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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711,755 + +0.3
711,756 + +0.3
711,757 + +0.1
711,914 + +0.5
711,916 + -0.1
712,036 - +1.1
712,051 + +0.2
714,706 - 15400 mRNA_7032 0.36 -0.6
715,015 - 15400 mRNA_7032 0.87 -0.6
715,024 + 15400 mRNA_7032 0.89 +1.8
715,174 - -0.2

Or see this region's nucleotide sequence