Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7502

Experiment: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 15870 and 15871 are separated by 938 nucleotides mRNA_7502: 15870 - K19788 OLA1 obg-like ATPase 1, at 444,835 to 446,831 15870 mRNA_7503: 15871 - Hypothetical Protein, at 447,770 to 449,407 15871

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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443,934 - -0.3
444,542 + +0.3
445,833 + 15870 mRNA_7502 0.50 +0.9
446,577 - 15870 mRNA_7502 0.87 +2.0
446,846 - -0.2
446,879 + +0.4
447,023 + -0.8
447,049 + -0.2
447,161 + -0.1
447,173 + -0.5
447,308 + -0.7
447,443 - +0.6
447,458 + +0.5
447,463 - -2.4
447,590 - +1.1
447,606 - -0.4
447,607 + -0.0
447,610 - -0.6
447,615 - +0.2
447,620 + +0.2
447,635 + +0.8
447,738 + -0.7
447,740 - -0.4
447,770 + -0.2

Or see this region's nucleotide sequence