Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7699

Experiment: 40 hrs Low Buoyancy

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 16066 and 16067 are separated by 190 nucleotides mRNA_7698: 16066 - Hypothetical Protein, at 864,285 to 865,332 16066 mRNA_7699: 16067 - K11681 SWR1 helicase SWR1, at 865,523 to 871,227 16067

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
remove
864,794 - 16066 mRNA_7698 0.49 -0.5
864,982 + 16066 mRNA_7698 0.67 +2.7
865,147 - 16066 mRNA_7698 0.82 -0.3
865,147 - 16066 mRNA_7698 0.82 -0.1
865,306 + -0.7
871,306 + -1.6
871,313 - +0.6
871,316 + +0.5
871,317 + +1.1
871,324 + -0.2
871,325 + +0.3
871,335 + +0.1
871,339 - -0.0
871,339 + +2.1
871,339 + +0.2
871,438 - +0.1
871,443 + +0.2
871,451 - +1.2
871,471 - -0.2
871,472 - +0.6
871,475 + +0.9
871,475 + -0.3
871,479 + -0.2
871,548 - -0.6
871,947 + +0.2
871,975 + -0.3
871,978 + -0.3
872,059 - +0.4
872,089 - -0.7
872,099 + +1.5
872,102 - -0.5

Or see this region's nucleotide sequence