Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_531

Experiment: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 8898 and 8899 are separated by 133 nucleotides8899 and 8900 are separated by 370 nucleotides mRNA_530: 8898 - Hypothetical Protein, at 1,264,038 to 1,264,727 8898 mRNA_531: 8899 - KOG1812 Predicted E3 ubiquitin ligase, at 1,264,861 to 1,266,270 8899 mRNA_532: 8900 - K05355 hexPS, COQ1 hexaprenyl-diphosphate synthase, at 1,266,641 to 1,268,317 8900

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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1,266,182 - +1.8

Or see this region's nucleotide sequence