Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1564

Experiment: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 9931 and 9932 are separated by 163 nucleotides mRNA_1563: 9931 - Hypothetical Protein, at 602,308 to 602,781 9931 mRNA_1564: 9932 - Hypothetical Protein, at 602,945 to 603,352 9932

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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602,016 - +1.6
602,192 + +1.4
602,329 + +0.6
602,889 - -0.1
602,899 - +1.6
603,437 + +0.9
603,676 + -2.2
603,816 - +1.0
603,909 + +1.3
604,112 + -0.8

Or see this region's nucleotide sequence