Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1616

Experiment: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt mRNA_1616: 9984 - K03232 EEF1B elongation factor 1-beta, at 729,946 to 731,113 9984

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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728,972 + +0.5
728,981 + -0.6
729,138 - -1.7
729,247 - +1.1
729,286 - -0.1
729,307 - +0.4
729,391 + -0.3
729,394 - +0.2
729,418 - -0.5
729,447 + +0.8
729,560 + +0.4
729,574 - -0.3
729,863 - +0.8
729,864 - +0.7
729,868 - -0.7
729,871 + +2.0
729,871 - -0.1
729,881 - -0.7
731,537 - +0.1
731,820 - +0.8
731,932 + +0.3

Or see this region's nucleotide sequence