Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1704

Experiment: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 10071 and 10072 are separated by 750 nucleotides10072 and 10073 are separated by 416 nucleotides mRNA_1703: 10071 - SUPERFAMILY--SSF49764, at 933,150 to 935,625 10071 mRNA_1704: 10072 - K17777 TIM9 mitochondrial import inner membrane translocase subunit TIM9, at 936,376 to 936,792 10072 mRNA_1705: 10073 - K03264 EIF6 translation initiation factor 6, at 937,209 to 938,526 10073

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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935,467 + +1.0
935,471 - -0.1
935,471 - +1.0
935,471 + -0.8
935,491 + +1.1
935,504 - +0.3
935,660 + +0.5
935,684 + -0.7
935,790 - +0.8
935,919 + -0.4
935,938 - +0.1
935,945 - +0.8
935,968 - +1.3
936,061 + +1.4
936,214 + -0.3

Or see this region's nucleotide sequence