Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2356

Experiment: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 10723 and 10724 are separated by 857 nucleotides mRNA_2355: 10723 - Hypothetical Protein, at 694,855 to 695,610 10723 mRNA_2356: 10724 - Hypothetical Protein, at 696,468 to 697,388 10724

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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695,657 - +0.8
695,808 - +0.9
695,958 - -0.5
695,961 + +1.3
695,967 - +0.0
695,970 - +0.1
695,971 + -0.1
696,136 + -0.5
696,698 + 10724 mRNA_2356 0.25 +0.1
697,267 - 10724 mRNA_2356 0.87 +0.8
697,279 + 10724 mRNA_2356 0.88 +0.1
697,586 + +0.2
697,688 - +0.3
697,705 + +1.1
697,851 - -0.1
697,956 + -0.9
697,970 - +0.4
697,974 + +2.1
698,287 + +1.6

Or see this region's nucleotide sequence