Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2560

Experiment: 40 hrs Median Buoyancy

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 10927 and 10928 are separated by 653 nucleotides mRNA_2559: 10927 - HMMPfam-Translin family-PF01997,SUPERFAMILY--SSF74784, at 441,201 to 442,474 10927 mRNA_2560: 10928 - Hypothetical Protein, at 443,128 to 444,142 10928

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
remove
442,679 + +1.0
442,759 - -0.6
442,765 + -0.1
442,852 - -0.2
442,983 - +0.2
443,070 + -0.1
443,223 - +0.9
443,336 - 10928 mRNA_2560 0.20 -0.3
443,388 + 10928 mRNA_2560 0.26 +0.7
443,414 - 10928 mRNA_2560 0.28 +0.8
443,642 - 10928 mRNA_2560 0.51 -0.2
443,650 + 10928 mRNA_2560 0.51 +0.4
443,823 - 10928 mRNA_2560 0.68 -0.0
443,939 - 10928 mRNA_2560 0.80 +0.4
443,942 + 10928 mRNA_2560 0.80 +1.1
444,401 - +0.1
444,623 + -0.6
444,631 - -0.2
444,708 - +0.3
444,799 - +1.5
444,820 - +0.2
444,834 - +0.9
444,882 - +1.8
444,944 + -0.3
444,975 - -0.0
445,002 - -0.1
445,081 - +0.4
445,094 - +0.4
445,111 - +0.0
445,116 - -0.1
445,120 - +0.2

Or see this region's nucleotide sequence