Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2917

Experiment: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt mRNA_2917: 11285 - Hypothetical Protein, at 546,492 to 547,553 11285

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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545,534 - +0.3
545,794 - +1.3
546,107 + +1.8
546,927 - 11285 mRNA_2917 0.41 +0.3
546,991 - 11285 mRNA_2917 0.47 -0.1
548,278 - -0.4
548,476 + +2.3

Or see this region's nucleotide sequence