Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3561

Experiment: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt mRNA_3561: 11929 - K06174 ABCE1, Rli1 ATP-binding cassette, sub-family E, member 1, at 53,453 to 55,273 11929

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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55,467 + +0.9
55,468 + -0.4
55,485 + -0.1
55,543 + +0.1
55,670 + +1.3
55,764 - +1.3
55,809 - +0.0

Or see this region's nucleotide sequence