Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3732

Experiment: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 12100 and 12101 are separated by 405 nucleotides mRNA_3732: 12100 - K02541 MCM3 DNA replication licensing factor MCM3, at 453,754 to 456,999 12100 mRNA_3733: 12101 - BLAST Hybrid signal transduction histidine kinase B [Leucoa..., at 457,405 to 460,471 12101

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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453,266 - +2.3
453,268 + +0.5
453,269 - -0.6
453,280 + +1.9
453,286 + +1.0
453,392 + +2.1
453,411 - +2.0
453,427 - -0.1
453,432 - +0.7
453,554 - +1.6
453,633 + +0.8
453,697 - -0.2
453,707 - +0.2
453,731 - +0.2
457,115 + +0.7
457,142 - -0.2
457,155 + -2.0
457,158 - +2.6
457,170 + -1.1
457,174 - +0.1
457,175 + +1.1
457,175 - -0.1
457,178 - +0.5
457,307 - -0.7
457,330 - -0.7
457,782 + 12101 mRNA_3733 0.12 -0.3

Or see this region's nucleotide sequence