Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4364

Experiment: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 12731 and 12732 are separated by 269 nucleotides mRNA_4363: 12731 - K19562 BIO3-BIO1 bifunctional dethiobiotin synthetase / adenosylmethionine---8-amino-7-oxononanoate aminotransferase, at 7,688 to 10,353 12731 mRNA_4364: 12732 - SUPERFAMILY--SSF48371, at 10,623 to 17,699 12732

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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10,411 + +0.7
10,416 + +0.4
10,568 + -0.2
10,602 + +1.9
10,703 - +0.2
10,714 - +2.0
10,823 + +0.3
12,831 + 12732 mRNA_4364 0.31 +0.9
16,458 + 12732 mRNA_4364 0.82 +1.0
17,318 - +0.0
17,334 + +0.1
17,495 - +1.0
17,536 + +1.0
17,555 - -1.3
17,646 + +2.0
17,777 + +1.0
17,795 + -0.8
17,798 + +0.1
17,798 + +1.7
18,058 - +0.6
18,113 + +0.2
18,275 + +0.1
18,635 - +1.1

Or see this region's nucleotide sequence