Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4695

Experiment: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 13062 and 13063 are separated by 328 nucleotides mRNA_4694: 13062 - K11252 H2B histone H2B, at 792,952 to 793,587 13062 mRNA_4695: 13063 - K11251 H2A histone H2A, at 793,916 to 794,516 13063

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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793,552 + -1.2
793,558 + -0.6
793,578 + -1.8
793,688 + +0.4
793,689 + +2.0
793,690 + +0.5
793,690 - +2.4
793,691 - +1.1
793,745 - -0.5
793,784 - +0.1
793,806 - -0.5
793,813 - -1.4
793,818 - +1.9
794,101 + 13063 mRNA_4695 0.31 +0.1
794,116 - 13063 mRNA_4695 0.33 -0.1
794,127 + 13063 mRNA_4695 0.35 +0.1
794,129 + 13063 mRNA_4695 0.35 -1.0
794,685 + -0.2
794,833 - -0.0
794,980 + +0.2
795,269 - +2.4
795,286 + +0.0
795,404 + -0.3

Or see this region's nucleotide sequence