Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4697

Experiment: 40 hrs Median Buoyancy

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 13064 and 13065 are separated by 323 nucleotides13065 and 13066 are separated by 245 nucleotides mRNA_4696: 13064 - KOG1756 Histone 2A, at 796,428 to 796,805 13064 mRNA_4697: 13065 - K05291 PIGS phosphatidylinositol glycan, class S, at 797,129 to 800,158 13065 mRNA_4698: 13066 - K12193 VPS24, CHMP3 charged multivesicular body protein 3, at 800,404 to 801,169 13066

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
remove
796,299 - +1.2
796,383 - +1.3
796,402 - -1.0
797,567 - 13065 mRNA_4697 0.14 -0.2
798,302 - 13065 mRNA_4697 0.39 +1.1
798,308 + 13065 mRNA_4697 0.39 +1.6
798,325 - 13065 mRNA_4697 0.39 -0.2
798,329 + 13065 mRNA_4697 0.40 +0.3
798,344 - 13065 mRNA_4697 0.40 +1.1
798,350 + 13065 mRNA_4697 0.40 -0.1
798,350 + 13065 mRNA_4697 0.40 -1.8
798,461 + 13065 mRNA_4697 0.44 -0.2
798,465 + 13065 mRNA_4697 0.44 +1.1
798,620 - 13065 mRNA_4697 0.49 +0.0
800,224 - -0.7
800,391 + +0.3

Or see this region's nucleotide sequence