Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5145

Experiment: 40 hrs Median Buoyancy

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 13512 and 13513 are separated by 449 nucleotides mRNA_5144: 13512 - BLAST putative mit domain-containing protein [Erysiphe neca..., at 8,147 to 8,373 13512 mRNA_5145: 13513 - Hypothetical Protein, at 8,823 to 11,115 13513

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
remove
7,889 - -0.0
8,019 - +1.1
8,069 + +0.8
8,108 + +1.3
8,267 - 13512 mRNA_5144 0.53 +2.0
8,396 + +0.1
8,651 + +0.2
8,952 - -0.4
9,234 + 13513 mRNA_5145 0.18 -0.2
9,549 + 13513 mRNA_5145 0.32 -1.1
9,552 - 13513 mRNA_5145 0.32 +0.7
9,605 + 13513 mRNA_5145 0.34 +1.4
9,660 + 13513 mRNA_5145 0.37 +0.5
9,687 - 13513 mRNA_5145 0.38 +1.4
9,968 - 13513 mRNA_5145 0.50 +0.2
10,059 + 13513 mRNA_5145 0.54 +0.1
10,092 - 13513 mRNA_5145 0.55 +1.4
10,104 + 13513 mRNA_5145 0.56 +0.1
10,524 + 13513 mRNA_5145 0.74 +0.3
10,550 + 13513 mRNA_5145 0.75 +0.2
10,973 - +0.4
11,386 + +0.3
11,841 - -0.5
11,970 - +0.6
11,980 + +1.1
12,113 + +0.4

Or see this region's nucleotide sequence