Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6074

Experiment: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt mRNA_6074: 14442 - Hypothetical Protein, at 1,583,110 to 1,584,006 14442

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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1,582,301 + +0.4
1,582,384 - +0.6
1,582,736 - -0.5
1,582,755 + +1.4
1,583,265 + 14442 mRNA_6074 0.17 +0.9
1,583,798 - 14442 mRNA_6074 0.77 +0.2
1,583,823 + 14442 mRNA_6074 0.79 +1.7
1,584,259 - -0.6
1,584,276 - -0.2
1,584,482 + +0.8
1,584,492 + -0.1
1,584,504 + +1.0
1,584,859 - +0.1

Or see this region's nucleotide sequence