Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6125

Experiment: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt mRNA_6125: 14493 - KOG1477 SPRY domain-containing proteins, at 61,654 to 62,774 14493

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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60,761 - +0.5
60,929 + +0.0
61,043 + +0.0
61,073 + +2.6
61,208 - -0.7
61,228 + -0.0
61,494 - -0.2
61,503 - +1.5
61,536 + +0.8
61,861 - 14493 mRNA_6125 0.18 +0.8
62,405 + 14493 mRNA_6125 0.67 -0.0
62,520 - 14493 mRNA_6125 0.77 -1.4
62,530 - 14493 mRNA_6125 0.78 +2.0
62,537 + 14493 mRNA_6125 0.79 -0.6
63,270 + -0.2
63,270 + -0.3
63,270 - +1.2
63,407 + +2.2
63,428 + -0.5
63,566 + +1.5
63,703 - -0.7
63,703 + -0.5
63,707 + +2.1
63,714 + +0.3

Or see this region's nucleotide sequence