Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6126

Experiment: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt mRNA_6126: 14494 - Hypothetical Protein, at 65,217 to 65,741 14494

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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64,292 - +0.4
64,330 + +0.1
64,333 - +1.8
64,441 - +0.1
64,465 + +1.0
64,563 + +1.1
64,652 - -0.2
64,736 + -0.3
64,884 - -0.2
64,946 - +0.5
65,001 - +1.9
65,037 - -0.3
65,055 - -0.1
65,069 + +0.2
65,070 + -0.1
65,079 + +0.5
65,162 + -0.1
65,190 + -0.3
65,201 + +1.7
65,208 + +1.1
65,209 + +0.2
65,212 - -0.6
65,241 + -0.3
65,245 - +0.0
65,306 - 14494 mRNA_6126 0.17 -0.5
65,371 + 14494 mRNA_6126 0.29 -0.5
65,376 + 14494 mRNA_6126 0.30 -0.5
65,379 + 14494 mRNA_6126 0.31 +0.1
65,380 + 14494 mRNA_6126 0.31 +0.8
65,383 - 14494 mRNA_6126 0.32 +0.5
65,413 + 14494 mRNA_6126 0.37 +0.7
65,444 + 14494 mRNA_6126 0.43 +1.5
65,494 - 14494 mRNA_6126 0.53 +0.1
65,567 - 14494 mRNA_6126 0.67 -0.1
65,648 - 14494 mRNA_6126 0.82 +0.7
65,690 + -1.4
66,103 + +1.1
66,170 + +0.8
66,348 - +0.9
66,400 - +0.3
66,527 + +1.2
66,692 + -0.3
66,698 + -0.9
66,700 + -0.5
66,733 - +0.2

Or see this region's nucleotide sequence