Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6298

Experiment: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 14665 and 14666 are separated by 152 nucleotides14666 and 14667 overlap by 11 nucleotides mRNA_6297: 14665 - K17970 MDV1, FIS2 mitochondrial division protein 1, at 469,151 to 471,840 14665 mRNA_6298: 14666 - K03842 ALG1 beta-1,4-mannosyltransferase, at 471,993 to 473,912 14666 mRNA_6299: 14667 - K14574 SDO1, SBDS ribosome maturation protein SDO1, at 473,902 to 475,228 14667

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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471,221 + 14665 mRNA_6297 0.77 +0.4
471,296 + 14665 mRNA_6297 0.80 +0.4
471,905 - +0.3
473,986 + -1.9

Or see this region's nucleotide sequence