Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6377

Experiment: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt mRNA_6377: 14745 - BLAST Williams-Beuren syndrome critical region protein 25 [..., at 673,553 to 674,016 14745

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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672,558 - +0.5
673,764 - 14745 mRNA_6377 0.45 -0.6
673,904 + 14745 mRNA_6377 0.76 +1.0
673,921 + 14745 mRNA_6377 0.79 +0.8
673,944 - 14745 mRNA_6377 0.84 -0.2
673,960 + 14745 mRNA_6377 0.88 +1.1
673,965 + 14745 mRNA_6377 0.89 -0.9
674,051 - -0.7
674,062 + -0.1
674,062 - -0.5
674,063 + +0.9
674,064 + -0.3
674,065 + +0.5
674,073 - +1.3
674,075 + +1.1
674,075 + -0.0
674,076 - +0.2
674,081 + -0.6
674,081 + -0.0
674,082 - +2.3
674,089 + +0.2
674,096 + -0.2
674,097 + +0.1
674,097 + +0.7
674,108 + -0.7
674,113 - +2.1
674,131 + -0.4
674,135 + -0.0
674,202 - +0.9
674,254 - +0.6
674,271 - +1.2
674,279 - +0.2
674,429 - +1.3
674,583 + -0.5

Or see this region's nucleotide sequence