Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6384

Experiment: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 14751 and 14752 are separated by 291 nucleotides14752 and 14753 are separated by 430 nucleotides mRNA_6383: 14751 - Hypothetical Protein, at 684,647 to 685,455 14751 mRNA_6384: 14752 - K13201 TIA1, TIAL1 nucleolysin TIA-1/TIAR, at 685,747 to 687,315 14752 mRNA_6385: 14753 - K03107 SRP68 signal recognition particle subunit SRP68, at 687,746 to 690,070 14753

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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685,130 + 14751 mRNA_6383 0.60 -0.8
685,554 - +0.5
685,554 - -0.4
685,560 + +0.0
685,563 - -0.4
685,570 - +1.4
685,582 + -1.0
685,588 - +0.2
685,594 + +1.4
687,312 + -1.0
687,315 - +0.8
687,632 - -1.9
687,667 - -0.3
687,747 - +0.3
687,774 - +0.6
688,075 + 14753 mRNA_6385 0.14 -1.2

Or see this region's nucleotide sequence