Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6391

Experiment: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 14758 and 14759 are separated by 424 nucleotides14759 and 14760 are separated by 284 nucleotides mRNA_6390: 14758 - KOG0605 NDR and related serine/threonine kinases, at 700,093 to 702,768 14758 mRNA_6391: 14759 - K11558 SPC25 kinetochore protein Spc25, fungi type, at 703,193 to 704,324 14759 mRNA_6392: 14760 - KOG4533 Uncharacterized conserved protein, at 704,609 to 706,220 14760

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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702,572 - -0.5
702,606 + +0.5
703,006 - +0.8
703,009 + +1.3
703,153 + +1.3
704,325 - -0.1
704,465 - +0.3
704,726 - +0.6
704,918 + 14760 mRNA_6392 0.19 +2.0

Or see this region's nucleotide sequence