Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6764

Experiment: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 15132 and 15133 are separated by 181 nucleotides mRNA_6764: 15132 - K12273 SEC66 translocation protein SEC66, at 85,299 to 86,536 15132 mRNA_6765: 15133 - HMMPfam-GDSL-like Lipase/Acylhydrolase family-PF13472,SUPERFAMILY--SSF52266, at 86,718 to 88,049 15133

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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84,618 - +1.1
84,795 - +0.1
84,797 + -0.5
84,950 + -0.4
84,957 - -0.3
84,971 - -0.0
85,086 + -0.1
85,103 + +0.4
85,105 + +0.5
85,114 - +0.6
85,224 - +0.2
85,227 - +0.1
85,241 - +2.5
85,264 - -0.5
86,418 + +0.9
86,553 + -0.8
86,554 - -0.9
86,686 + -1.3
86,687 - +0.7
86,690 - -0.6
86,695 + +0.8
86,709 + -0.6
86,853 - 15133 mRNA_6765 0.10 +0.4
86,979 + 15133 mRNA_6765 0.20 +0.6
86,988 - 15133 mRNA_6765 0.20 +1.3
86,991 + 15133 mRNA_6765 0.20 +0.4
86,993 - 15133 mRNA_6765 0.21 -0.3
87,122 - 15133 mRNA_6765 0.30 -0.2
87,316 - 15133 mRNA_6765 0.45 -0.4

Or see this region's nucleotide sequence