Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6847

Experiment: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 15215 and 15216 are separated by 807 nucleotides mRNA_6847: 15215 - Hypothetical Protein, at 265,301 to 266,497 15215 mRNA_6848: 15216 - KOG1514 Origin recognition complex, subunit 1, and related proteins, at 267,305 to 268,256 15216

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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264,400 + +0.8
264,551 + +1.2
264,583 + +0.2
264,707 + +0.1
264,709 - -0.2
264,857 + -1.7
264,858 - -0.4
264,868 - +0.6
264,870 - -0.6
264,872 - -1.0
264,875 + +0.0
264,877 + +0.1
264,886 + -0.9
264,893 - -0.3
264,897 - +1.1
264,906 - +0.1
264,907 - +0.5
264,925 - +0.5
264,981 + -0.4
265,010 + +1.5
265,011 - -0.5
265,015 + +0.6
265,030 + -0.4
265,045 + +1.5
265,048 + +0.5
265,050 + +1.2
265,183 + -0.7
265,189 + +2.2
265,194 - +0.9
265,194 - -0.1
265,199 - +1.8
265,220 + -0.2
265,312 - +0.9
265,315 + +1.2
266,108 - 15215 mRNA_6847 0.67 -0.6
266,132 + 15215 mRNA_6847 0.69 +0.2
266,169 + 15215 mRNA_6847 0.73 -0.8
266,486 - +0.2
266,819 - +0.9
266,899 + -1.1
266,978 + -0.3
267,211 + -0.0
267,224 + -0.7

Or see this region's nucleotide sequence