Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7133

Experiment: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 15500 and 15501 are separated by 242 nucleotides mRNA_7132: 15500 - K16938 SEPT3_9_12 septin 3/9/12, at 952,780 to 954,588 15500 mRNA_7133: 15501 - Hypothetical Protein, at 954,831 to 956,443 15501

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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954,252 - 15500 mRNA_7132 0.81 -0.1
954,882 - -0.2
955,075 - 15501 mRNA_7133 0.15 -0.2
955,201 + 15501 mRNA_7133 0.23 +1.0
955,363 - 15501 mRNA_7133 0.33 +0.3
955,478 - 15501 mRNA_7133 0.40 +1.3
955,595 + 15501 mRNA_7133 0.47 +1.8
955,643 + 15501 mRNA_7133 0.50 +1.0
955,646 - 15501 mRNA_7133 0.51 +2.0
956,239 - 15501 mRNA_7133 0.87 +0.1
956,499 + -0.4
956,532 + -0.7
956,664 + -0.2
956,675 + -1.4
956,676 - +0.3
956,683 - -0.2
956,720 + -1.3
956,978 + +0.4
957,002 - -0.3
957,010 + +0.5
957,417 - -0.9

Or see this region's nucleotide sequence