Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7388

Experiment: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 15755 and 15756 are separated by 684 nucleotides mRNA_7387: 15755 - Hypothetical Protein, at 159,588 to 160,374 15755 mRNA_7388: 15756 - K01951 guaA, GMPS GMP synthase (glutamine-hydrolysing), at 161,059 to 163,298 15756

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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160,440 - -2.9
163,356 - +1.2
163,356 - +0.8
163,366 + -0.4
163,367 - +0.7
163,367 + -0.2
163,369 - -0.6
163,373 - +0.8
163,444 + +0.6
164,147 - -0.8

Or see this region's nucleotide sequence