Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7677

Experiment: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 16044 and 16045 are separated by 495 nucleotides16045 and 16046 are separated by 351 nucleotides mRNA_7676: 16044 - Hypothetical Protein, at 818,455 to 819,544 16044 mRNA_7677: 16045 - Hypothetical Protein, at 820,040 to 821,034 16045 mRNA_7678: 16046 - K00657 speG diamine N-acetyltransferase, at 821,386 to 822,078 16046

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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819,168 - 16044 mRNA_7676 0.65 -0.7
819,511 + +0.0
819,631 + -0.4
819,631 - +0.1
819,749 + -0.5
819,767 - +0.8
819,890 + +1.6
819,901 + +1.7
819,902 - +0.2
819,905 + +0.1
820,039 - +0.2
820,343 + 16045 mRNA_7677 0.30 -0.3
820,471 - 16045 mRNA_7677 0.43 -1.3
820,498 + 16045 mRNA_7677 0.46 -0.6
820,616 + 16045 mRNA_7677 0.58 -0.6
820,667 + 16045 mRNA_7677 0.63 +0.5
820,668 - 16045 mRNA_7677 0.63 -1.0
820,776 - 16045 mRNA_7677 0.74 +0.6
820,787 + 16045 mRNA_7677 0.75 -0.6
821,065 - -0.6
821,071 - -0.4
821,133 - +1.7
821,219 - +1.7
821,351 + +1.0
821,724 + 16046 mRNA_7678 0.49 +0.1
821,824 + 16046 mRNA_7678 0.63 +2.1
821,827 + 16046 mRNA_7678 0.64 +0.6
821,974 + 16046 mRNA_7678 0.85 +0.0

Or see this region's nucleotide sequence