Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7706

Experiment: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt mRNA_7706: 16074 - Hypothetical Protein, at 892,554 to 894,176 16074

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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891,564 + -0.6
891,570 + +0.1
891,610 - -0.2
891,636 + +1.3
891,703 + +0.3
891,715 - +0.7
891,721 + +0.8
891,723 + +0.8
891,739 - +1.8
891,740 + +0.3
891,745 - +0.0
891,759 + +0.2
891,761 - +2.3
891,780 - +0.4
891,791 - +2.3
891,849 - -0.2
891,853 - -0.2
891,864 + +1.8
891,873 - +0.0
891,877 + +1.6
891,882 - -0.2
891,931 - +1.7
891,931 - +0.2
891,933 - -0.1
891,934 + +0.7
891,937 - -0.6
891,941 - +0.3
891,956 - +0.3
891,964 + -0.7
891,968 + -0.1
891,973 - -0.2
891,975 + +0.7
891,982 - +0.9
891,997 + +0.8
892,014 - +0.8
892,104 - +1.9
892,105 - +0.2
892,114 + +0.2
892,133 - -0.8
892,242 + +0.3
892,261 + +1.2
892,268 - +0.1
892,296 + +0.5
892,401 + +0.9
892,437 + +0.8
892,463 + +0.4
892,463 + +1.1
892,503 - +0.4
892,515 + +1.8
892,534 - +0.2
892,541 + +0.4
892,554 - +0.5
892,556 + -0.1
892,709 - +2.5
892,721 + 16074 mRNA_7706 0.10 -0.8
892,843 + 16074 mRNA_7706 0.18 +0.5
893,088 - 16074 mRNA_7706 0.33 -1.1
893,089 + 16074 mRNA_7706 0.33 -0.0
893,419 - 16074 mRNA_7706 0.53 +1.0
893,738 + 16074 mRNA_7706 0.73 +1.6
893,749 + 16074 mRNA_7706 0.74 +1.4
894,429 + +1.5
894,429 - -0.3
894,436 - -0.4
894,464 + +0.1
894,590 + +0.6
894,605 - +0.4
894,607 - +0.7
894,608 + +0.1
894,737 + -0.5
894,743 - +0.4
894,931 + +0.2
894,940 + +1.1
895,059 + +0.1

Or see this region's nucleotide sequence