Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8267

Experiment: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 16634 and 16635 are separated by 435 nucleotides16635 and 16636 are separated by 359 nucleotides mRNA_8266: 16634 - K07297 ADIPOR adiponectin receptor, at 804,995 to 806,356 16634 mRNA_8267: 16635 - K01897 ACSL, fadD long-chain acyl-CoA synthetase, at 806,792 to 809,289 16635 mRNA_8268: 16636 - K11511 APITD1, CENPS, MHF1 centromere protein S, at 809,649 to 810,847 16636

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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805,938 + 16634 mRNA_8266 0.69 -1.5
806,226 - -1.8
806,271 + -0.7
806,382 - +0.3
806,390 - -0.6
806,508 - -0.5
806,526 + -0.1
806,526 - +1.0
806,528 - -0.6
806,530 - -0.4
806,530 - -0.7
806,539 - +1.1
806,550 - -0.1
806,554 - +0.5
806,557 + -1.3
806,560 + +0.8
806,589 - -0.5
806,639 - +0.5
806,640 + +1.3
806,648 - +1.1
806,691 - +0.6
806,718 + +0.3
806,730 + +0.0
806,969 - +0.5
806,970 + +0.3
806,999 - -1.9
807,168 - 16635 mRNA_8267 0.15 +1.0
807,422 - 16635 mRNA_8267 0.25 +0.4
808,313 + 16635 mRNA_8267 0.61 -1.1
809,285 - -0.2
809,286 - +0.1
809,290 - +0.0
809,302 - +1.3
809,342 + +0.6
809,427 - -0.9
809,430 - +0.0
809,474 + +1.4
809,476 - +0.6
810,061 - 16636 mRNA_8268 0.34 +0.3
810,200 - 16636 mRNA_8268 0.46 -0.6
810,215 - 16636 mRNA_8268 0.47 -0.1

Or see this region's nucleotide sequence