Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_426

Experiment: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 8793 and 8794 are separated by 294 nucleotides mRNA_425: 8793 - HMMPfam-NmrA-like family-PF05368,SUPERFAMILY--SSF51735, at 991,145 to 992,451 8793 mRNA_426: 8794 - Hypothetical Protein, at 992,746 to 993,344 8794

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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992,267 - 8793 mRNA_425 0.86 +0.3
992,391 + -0.2
992,974 - 8794 mRNA_426 0.38 -0.2
993,296 + +2.2
993,298 + +0.1
993,589 + +0.9
993,747 + -0.4

Or see this region's nucleotide sequence