Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_837

Experiment: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 9204 and 9205 are separated by 300 nucleotides9205 and 9206 are separated by 598 nucleotides mRNA_836: 9204 - K17387 KIF23 kinesin family member 23, at 2,001,159 to 2,005,251 9204 mRNA_837: 9205 - KOG2061 Uncharacterized MYND Zn-finger protein, at 2,005,552 to 2,007,276 9205 mRNA_838: 9206 - K06628 CDC45 cell division control protein 45, at 2,007,875 to 2,010,622 9206

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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2,005,032 - +1.8
2,005,396 + -0.0
2,007,310 - -1.5
2,007,463 + -0.3
2,007,502 + +0.0
2,007,588 + +0.1
2,007,589 - -0.6
2,007,589 + -1.0
2,007,591 - -0.0
2,007,593 - +1.3
2,007,594 + +1.2
2,007,601 + -0.5
2,007,607 - +1.2
2,007,612 + +0.2
2,007,616 + +1.8
2,007,617 - +1.2
2,007,624 + +1.8
2,007,709 + +0.4
2,007,719 + +0.3

Or see this region's nucleotide sequence