Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_982

Experiment: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 9350 and 9351 are separated by 456 nucleotides mRNA_982: 9350 - Hypothetical Protein, at 129,189 to 130,203 9350 mRNA_983: 9351 - K02974 RP-S24e, RPS24 small subunit ribosomal protein S24e, at 130,660 to 132,036 9351

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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128,242 + -0.8
128,376 - -0.4
128,389 - +0.7
128,396 + +0.1
128,505 - +0.5
128,689 + +0.2
128,692 - +0.1
128,692 + -0.8
128,699 + +0.9
128,810 - +0.1
128,967 + +0.7
129,103 - +0.7
129,104 - -0.4
129,106 - +0.9
129,117 - +0.2
129,120 - +0.5
129,127 - +0.4
129,250 - +2.0
129,251 - -0.4
129,252 + +0.2
129,253 - -0.2
129,264 - +0.1
129,264 + -0.5
129,274 + -0.1
129,274 - +1.1
129,293 + 9350 mRNA_982 0.10 +1.8
129,421 + 9350 mRNA_982 0.23 +1.0
129,561 - 9350 mRNA_982 0.37 +0.1
129,583 + 9350 mRNA_982 0.39 +0.2
129,867 + 9350 mRNA_982 0.67 +1.7
130,264 - +0.1
130,428 - +2.1
130,446 + -0.4
130,451 + -0.0
130,451 + +2.2
130,588 + +0.7
130,591 + -0.3

Or see this region's nucleotide sequence