Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1323

Experiment: 40 hrs Median Buoyancy

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 9690 and 9691 are separated by 74 nucleotides9691 and 9692 are separated by 526 nucleotides mRNA_1322: 9690 - K11662 ACTR6, ARP6 actin-related protein 6, at 927,422 to 929,610 9690 mRNA_1323: 9691 - Hypothetical Protein, at 929,685 to 931,310 9691 mRNA_1324: 9692 - Hypothetical Protein, at 931,837 to 933,855 9692

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
remove
929,846 + +0.2
929,858 - 9691 mRNA_1323 0.11 -1.9
930,044 - 9691 mRNA_1323 0.22 +0.6
930,593 - 9691 mRNA_1323 0.56 -0.4
930,867 - 9691 mRNA_1323 0.73 +0.6
930,909 - 9691 mRNA_1323 0.75 -1.5
930,911 - 9691 mRNA_1323 0.75 +0.4
931,056 - 9691 mRNA_1323 0.84 -0.5
931,105 + 9691 mRNA_1323 0.87 +1.4
931,196 - +1.5
931,535 + +1.0
931,627 - -0.9
931,629 + +0.9
931,682 + +0.6
931,708 + -0.0
931,801 + +1.9
931,929 - +2.2
931,935 + +1.8
931,942 - +1.3
932,059 + 9692 mRNA_1324 0.11 +2.7

Or see this region's nucleotide sequence