Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1526

Experiment: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 9893 and 9894 are separated by 387 nucleotides mRNA_1525: 9893 - K08267 RICTOR rapamycin-insensitive companion of mTOR, at 507,359 to 512,878 9893 mRNA_1526: 9894 - K02880 RP-L17e, RPL17 large subunit ribosomal protein L17e, at 513,266 to 514,362 9894

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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513,042 - +0.4
513,043 + -0.9
513,043 + +0.3
513,064 + +0.2
514,528 - -2.3
514,543 - -1.0
514,667 + +0.7
514,698 + -0.8
514,780 - -0.3
514,813 - -1.2
514,989 - -0.7
515,117 + -0.5

Or see this region's nucleotide sequence