Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1584

Experiment: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 9951 and 9952 are separated by 633 nucleotides mRNA_1583: 9951 - HMMPfam-Mediator complex protein-PF10280, at 655,631 to 656,397 9951 mRNA_1584: 9952 - Hypothetical Protein, at 657,031 to 658,127 9952

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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656,580 - +0.5
656,861 + -1.3
657,019 + +1.7
657,253 - 9952 mRNA_1584 0.20 +0.7

Or see this region's nucleotide sequence