Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2031

Experiment: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt mRNA_2031: 10399 - BLAST TPR-like protein [Auricularia subglabra TFB-10046..., at 792,632 to 792,952 10399

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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791,657 + +0.0
791,835 - +0.7
792,124 + -0.5
792,668 + 10399 mRNA_2031 0.11 +0.0
793,010 - -0.4
793,160 - -0.6
793,320 + +1.8
793,561 + -0.1
793,576 - -0.4
793,619 + +2.4

Or see this region's nucleotide sequence