Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2695

Experiment: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt mRNA_2695: 11063 - Hypothetical Protein, at 23,956 to 24,690 11063

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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22,975 - +0.6
22,975 - +1.4
23,076 + -1.3
23,235 - +0.3
23,391 - -0.1
23,404 - -1.5
23,406 - +0.8
23,412 - +0.3
23,429 + -2.3
23,435 - -0.6
23,671 - +0.5
23,869 + +0.7
23,872 - +0.0
23,880 + -0.0
23,881 + -1.0
24,034 + 11063 mRNA_2695 0.11 +0.3
24,054 + 11063 mRNA_2695 0.13 -1.3
24,292 + 11063 mRNA_2695 0.46 -0.1
24,302 - 11063 mRNA_2695 0.47 -1.5
24,475 + 11063 mRNA_2695 0.71 +1.7
24,520 - 11063 mRNA_2695 0.77 +0.4
24,557 - 11063 mRNA_2695 0.82 -0.5
24,577 - 11063 mRNA_2695 0.84 +0.2
24,578 - 11063 mRNA_2695 0.85 +0.2
24,632 + +1.3
24,734 + +0.4
24,742 + +0.7
24,743 + -0.1
24,759 - +1.0
24,880 - +0.4
24,881 - -2.3
24,882 - +1.6
24,884 - -1.1
24,887 - -0.4
24,890 + -0.2
24,893 + +0.3
24,898 - +0.9
24,906 - +0.2
24,910 - -0.1
24,988 + +0.6
25,051 + -1.7
25,101 - +1.4
25,175 - +1.2
25,194 - +0.9
25,236 + +2.9
25,258 - +0.4
25,263 - -1.9
25,292 - +3.0
25,294 - +0.4
25,294 - +1.6
25,313 + -0.1
25,344 - +0.4
25,362 - -0.6
25,376 + +0.0
25,439 - +0.8
25,447 + +1.2
25,459 + -0.2
25,466 - -0.9
25,469 - -1.6
25,471 - +2.5
25,575 + +0.1
25,586 + -0.4
25,642 + -1.1
25,654 - +0.8
25,668 + +2.1

Or see this region's nucleotide sequence