Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2959

Experiment: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 11327 and 11328 are separated by 411 nucleotides mRNA_2959: 11327 - KOG4554 Protein involved in inorganic phosphate transport, at 651,549 to 652,747 11327 mRNA_2960: 11328 - KOG2617 Citrate synthase, at 653,159 to 654,002 11328

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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650,566 + -0.7
650,688 - +0.8
651,118 + -0.4
651,134 - -1.1
651,142 + +0.4
651,289 + -0.1
651,299 + -0.6
651,386 + +1.4
651,447 + -0.8
651,450 - +0.2
651,560 + -0.9
651,582 - +0.6
652,746 - -0.1
653,066 - -0.3
653,166 - +1.2
653,274 - 11328 mRNA_2960 0.14 +0.8

Or see this region's nucleotide sequence